These are the sources and citations used to research a very specific introduction of metagenomics. This bibliography was generated on Cite This For Me on

  • Journal

    Chen, K. and Pachter, L.

    Bioinformatics for Whole-Genome Shotgun Sequencing of Microbial Communities

    2005 - PLoS Computational Biology

    In-text: (Chen and Pachter, 2005)

    Your Bibliography: Chen, K. and Pachter, L., 2005. Bioinformatics for Whole-Genome Shotgun Sequencing of Microbial Communities. PLoS Computational Biology, 1(2), p.e24.

  • Book

    DeLong, E.

    Microbial Metagenomics, Metatranscriptomics, and Metaproteomics

    2013 - Elsevier Science - Burlington

    In-text: (DeLong, 2013)

    Your Bibliography: DeLong, E., 2013. Microbial Metagenomics, Metatranscriptomics, and Metaproteomics. Burlington: Elsevier Science.

  • Website

    What is Next-Generation DNA Sequencing | Train online

    2015

    In-text: (What is Next-Generation DNA Sequencing | Train online, 2015)

    Your Bibliography: Ebi.ac.uk. 2015. What is Next-Generation DNA Sequencing | Train online. [online] Available at: <http://www.ebi.ac.uk/training/online/course/ebi-next-generation-sequencing-practical-course/what-you-will-learn/what-next-generation-dna-> [Accessed 19 February 2015].

  • Website

    16s rRNA Sequencing | Identify strains that may not be found using other methods

    2015

    In-text: (16s rRNA Sequencing | Identify strains that may not be found using other methods, 2015)

    Your Bibliography: Illumina.com. 2015. 16s rRNA Sequencing | Identify strains that may not be found using other methods. [online] Available at: <http://www.illumina.com/applications/microbiology/microbial-sequencing-methods/16S-rrna-sequencing.html> [Accessed 17 February 2015].

  • Journal

    Ledergerber, C. and Dessimoz, C.

    Base-calling for next-generation sequencing platforms

    2011 - Briefings in Bioinformatics

    In-text: (Ledergerber and Dessimoz, 2011)

    Your Bibliography: Ledergerber, C. and Dessimoz, C., 2011. Base-calling for next-generation sequencing platforms. Briefings in Bioinformatics, 12(5), pp.489-497.

  • Website

    Semiconductor Sequencing Technology | Life Technologies

    2015

    In-text: (Semiconductor Sequencing Technology | Life Technologies, 2015)

    Your Bibliography: Lifetechnologies.com. 2015. Semiconductor Sequencing Technology | Life Technologies. [online] Available at: <http://www.lifetechnologies.com/uk/en/home/life-science/sequencing/next-generation-sequencing/ion-torrent-next-generation-sequencing-technology.html> [Accessed 15 February 2015].

  • Journal

    Ma, J., Prince, A. and Aagaard, K.

    Use of Whole Genome Shotgun Metagenomics: A Practical Guide for the Microbiome-Minded Physician Scientist

    2014 - Seminars in Reproductive Medicine

    In-text: (Ma, Prince and Aagaard, 2014)

    Your Bibliography: Ma, J., Prince, A. and Aagaard, K., 2014. Use of Whole Genome Shotgun Metagenomics: A Practical Guide for the Microbiome-Minded Physician Scientist. Seminars in Reproductive Medicine, 32(01), pp.005-013.

  • Journal

    Namiki, T., Hachiya, T., Tanaka, H. and Sakakibara, Y.

    MetaVelvet: an extension of Velvet assembler to de novo metagenome assembly from short sequence reads

    2012 - Nucleic Acids Research

    In-text: (Namiki, Hachiya, Tanaka and Sakakibara, 2012)

    Your Bibliography: Namiki, T., Hachiya, T., Tanaka, H. and Sakakibara, Y., 2012. MetaVelvet: an extension of Velvet assembler to de novo metagenome assembly from short sequence reads. Nucleic Acids Research, 40(20), pp.e155-e155.

  • Website

    OTU picking strategies in QIIME — Homepage

    2015

    In-text: (OTU picking strategies in QIIME — Homepage, 2015)

    Your Bibliography: Qiime.org. 2015. OTU picking strategies in QIIME — Homepage. [online] Available at: <http://qiime.org/1.7.0/tutorials/otu_picking.html> [Accessed 16 February 2015].

  • Journal

    Ramette, A.

    Multivariate analyses in microbial ecology

    2007 - FEMS Microbiology Ecology

    In-text: (Ramette, 2007)

    Your Bibliography: Ramette, A., 2007. Multivariate analyses in microbial ecology. FEMS Microbiology Ecology, 62(2), pp.142-160.

  • Journal

    Schirmer, M., Ijaz, U. Z., D'Amore, R., Hall, N., Sloan, W. T. and Quince, C.

    Insight into biases and sequencing errors for amplicon sequencing with the Illumina MiSeq platform

    2015 - Nucleic Acids Research

    In-text: (Schirmer et al., 2015)

    Your Bibliography: Schirmer, M., Ijaz, U., D'Amore, R., Hall, N., Sloan, W. and Quince, C., 2015. Insight into biases and sequencing errors for amplicon sequencing with the Illumina MiSeq platform. Nucleic Acids Research,.

  • Journal

    Sharpton, T. J.

    An introduction to the analysis of shotgun metagenomic data

    2014 - Front. Plant Sci.

    In-text: (Sharpton, 2014)

    Your Bibliography: Sharpton, T., 2014. An introduction to the analysis of shotgun metagenomic data. Front. Plant Sci., 5.

  • Journal

    Thomas, T., Gilbert, J. and Meyer, F.

    Metagenomics - a guide from sampling to data analysis

    2012 - Microbial Informatics and Experimentation

    In-text: (Thomas, Gilbert and Meyer, 2012)

    Your Bibliography: Thomas, T., Gilbert, J. and Meyer, F., 2012. Metagenomics - a guide from sampling to data analysis. Microbial Informatics and Experimentation, 2(1), p.3.

  • Website

    Dr Umer Zeeshan Ijaz

    2015

    In-text: (Dr Umer Zeeshan Ijaz, 2015)

    Your Bibliography: Userweb.eng.gla.ac.uk. 2015. Dr Umer Zeeshan Ijaz. [online] Available at: <http://userweb.eng.gla.ac.uk/umer.ijaz/> [Accessed 15 February 2015].

  • Journal

    Wooley, J. C., Godzik, A. and Friedberg, I.

    A Primer on Metagenomics

    2010 - PLoS Computational Biology

    In-text: (Wooley, Godzik and Friedberg, 2010)

    Your Bibliography: Wooley, J., Godzik, A. and Friedberg, I., 2010. A Primer on Metagenomics. PLoS Computational Biology, 6(2), p.e1000667.

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